CompBioMed and DICE hosting a workshop about biomedical data management
CompBioMed Centre of Excellence and the DICE project will be hosting a hands-on workshop regarding biomedical data management and publication. A great opportunity for participants and our Early Stage Researchers to gain experience on how HPC biomedical researchers use data management services to make their data FAIR.
The workshop will be held on the 21st of June 2022 in Bologna (Italy) at the premises of CINECA, one of the MeDiTATe Consortium partners.
The event is free of charge and few places are still available. Registration can be completed at the following link: Data management and publication – A DICE&CompBioMed Hackathon.
Great participation of the MeDiTATe project in the ESBiomech 2022 congress
The MeDiTATe project will be participating in the ESB 2022, the 27th Congress of the European Society of Biomechanics. The event will take place from June 26th to 29th in Porto, Portugal. In this occasion several Early Stage Researchers will be presenting the results of their activities. Here’s the complete list of the participants with their work.
ESR 01, Antonio Martinez Pascual: Evaluating the effect of computational domain reduction in ascending aorta simulations.
Novel diagnostic techniques are arising by enhancing the diagnosis of cardiovascular diseases with the insight given by simulation. However, it is often difficult to adapt these advances into everyday clinical-routine as data needed to personalize the models is often missing, or incomplete. In this study, the effect of reducing the computational domain for ascending thoracic aortic aneurysm (ATAA) simulations by eliminating the arch and descending sections is assessed. The ultimate goal is to understand the requirements for fast and efficient patient-specific modeling, in order to develop appropriate workflows focused on solving real clinical needs.
ESR 02, Leonardo Geronzi: Calibration of the mechanical boundary conditions of a thoracic aorta model including the heart motion effect. In this study, an accurate patient-specific computational model of the thoracic aorta is presented and a new procedure for optimising the visco-elastic structural supports reproducing the interaction of the aorta with the spine and the soft tissue is proposed. The model allows for the inclusion of the heart motion applied at the level of the annulus and is validated by using the available MRI sequences of the vessel. Read More
A talk with Prof. Marco Evangelos Biancolini
Here is a chat with Prof. Marco Evangelos Biancolini, Associate Professor and member of the Scientific board of the Doctorate School at the University of Rome “Tor Vergata”. He is the Principal Investigator of the MeDiTATe project and the academic supervisor for Early Stage Researchers 1, 9 and 12.
Professor Biancolini, the MeDiTATe project is now in its 2nd year. What are your thoughts at this stage of the project?
I am writing this answer at 33000ft while traveling toward Trondheim to reach all our ESRs for a training event. Sounds good, isn’t it? Despite the pandemic and all the difficulties faced we are now in a very good position. We are recovering all the missed opportunities to work together in person. All the IRPs are progressing good and the hard time of the lockdown and at home working is, hopefully, ended. Last week we had an internal meeting to arrange the upcoming summer school in Greece. The industrial and scientific program is progressing as expected and we are all enthusiastic to consolidate our MeDiTATe community thanks to the many in person meetings we are finally allowed to do.
Let’s talk about the idea behind MeDiTATe. The project received funding from the EU in the Framework of Horizon 2020 programme, therefore it is clear that the approach that you propose meets the EU’s ambition to exploit scientific research to improve the treatment of the Cardiovascular diseases and patient care. How can the scientific community benefit from your work?
I am proud and happy to lead this project. MeDiTATe originated from an industrial and scientific network already active in the in silico approach and committed toward the creation of Medical Digital Twins. We are a European Industrial Doctorate (EID) and the synergy between industry, academic and health research is a paramount. Our EID nature is not only important for our ESRs that are acquiring top skills and a mindset oriented toward the deployment of what learnt, but also for the high TRL we can reach thanks to the industrial partners involvement that is allowing us to start the transfer of results right now, in the middle of the project. It is worth to emphasize that we have already pending patents. This means that benefits are not only limited to the scientific community but will soon help patients, and this is our major focus. We are not doing here basic research and I believe that one of the major benefit for the scientific community will be in the strong connection we are creating with cohorts of patient data within MeDiTATe and the state of the art and beyond state of the art approach we are setting up in the definition of a Medical Digital Twin. Read More
The MeDiTATe project will participate in the second edition of International Conference on Nonlinear Solid Mechanics (ICoNSOM) 2022
Early Stage Researcher 07, Federica Galbiati, will present her work entitled “Homeostatic, stress driven, isotropic growth in soft tissues: a hypoelastic micromechanical framework” during the next International Conference on Nonlinear Solid Mechanics (ICoNSOM, June 16th, Alghero). Growth in soft tissues is the continuous process of mass deposition/reabsorption to maintain a homeostatic mechanical state. This process plays an important role in both physiological and pathological development of tissues. The proposed study present a micromechanical framework that extend the classical growth model towards the realm of truly multiscale models, showing its capability to model growth in case of an independent growth-related deformation for each constituent.
ANSYS Simulation World
ANSYS, one of the Beneficiaries of the MeDiTATe Consortium, organized a virtual free event entitled “ANSYS Simulation World”, whose idea is to inspire engineers, R&D, and manufacturing professionals about the transformative powers of engineering simulation. Many topics, such as the healthcare dedicated session, were presented and are of great interest for the Individual Research Projects of our Early Stage Researchers. The global event was held on May 18th, and it is now possible to view it on-demand at the following link: Home | Ansys Simulation World 2022
Meeting and Course at SINTEF in Trondheim
From May 3rd to 6th SINTEF welcomed the MeDiTATe Consortium in Trondheim, Norway. On May 3rd a one-day progress meeting took place in hybrid modality. In this occasion the Steering Committee presented the status of the project, while each Early Stage Researcher had the opportunity to share the progresses of her/his own Individual Research Project. Between May 4th and 6th SINTEF organized a course about software and tools for Image Guided Therapy (IGT), as part of the MeDiTATe training programme. The Early Stage Researchers had the opportunity to learn more about tracking technologies, registration techniques and navigation systems for IGT. They attended introductory lectures about software frameworks and software development for IGT. The last part of the course focused on image-guided endovascular therapy, with a practical session with clinical simulators for endovascular repair.
Visiting Fondazione Toscana Gabriele Monasterio in Massa
Last April, Simona Celi and BioCardioLab team (Fondazione Toscana Gabriele Monasterio) welcomed Marco Biancolini (University of Tor Vergata), Laurence Rouet (Philips), and Marta Bracco (ESR 13). An intensive experimental session was carried out to acquire Doppler images of a AAA phantom manufactured by Maria Nicole Antonuccio (ESR 14), which is currently hosted by BioCardiolab. The model was plugged to a hybrid mock-up circulatory loop system, which is part of the research activity of Francesco Bardi (ESR 10), to mimick the blood flow inside the vessel. Both Color Doppler and B-mode ultrasound cineloops were acquired and will be employed in the projects of ESR 14 and ESR 13. Moreover, Maria Nicole and Marta had the chance to discuss and brainstorm with three of their supervisors.
A new Partner for the MeDiTATe project: Institut National des Sciences Appliquées de Lyon
SINTEF will present the MeDiTATe project at the 33rd Annual Society for Medical Innovation and Technology (SMIT) Conference
The MEDITATE project will be represented by partner SINTEF at the 33rd Annual Society for Medical Innovation and Technology (SMIT) Conference. SINTEF, in collaboration with the local hospital (Future Operating Room at the Research department), is responsible for organizing a session related to the future operating room and allied technologies. Thomas Langø at SINTEF will describe on-going projects related to image-guided procedures, including endovascular therapy and MEDITATE activities (mainly related to ESR 11, Monica Emendi, and ESR 12, Eirini Kardampiki).
Recent Posts
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- Monica Emendi successfully defended her PhD thesis defense
- Martino Andrea Scarpolini successfully defended his PhD thesis defense
- Eirini Kardampiki successfully defended her PhD thesis defense
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